Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trove2O08848 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trove2O08848 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.08□□□□□ -0.32
Trove2O08848 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.08□□□□□ -0.32
Trove2O08848 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Trove2O08848 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.07□□□□□ -0.32
Trove2O08848 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.07□□□□□ -0.32
Trove2O08848 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.07□□□□□ -0.32
Trove2O08848 Gm6218-201ENSMUST00000219812 628 ntBASIC13.07□□□□□ -0.32
Trove2O08848 Gm19220-201ENSMUST00000222682 803 ntBASIC13.07□□□□□ -0.32
Trove2O08848 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Gm5161-201ENSMUST00000075243 853 ntBASIC13.07□□□□□ -0.32
Trove2O08848 Gm24447-201ENSMUST00000083977 338 ntBASIC13.07□□□□□ -0.32
Trove2O08848 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.07□□□□□ -0.32
Trove2O08848 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.07□□□□□ -0.32
Trove2O08848 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Trove2O08848 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trove2O08848 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Trove2O08848 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.06□□□□□ -0.32
Trove2O08848 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trove2O08848 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trove2O08848 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.06□□□□□ -0.32
Trove2O08848 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.06□□□□□ -0.32
Trove2O08848 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Trove2O08848 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trove2O08848 Gm26464-201ENSMUST00000157094 305 ntBASIC13.06□□□□□ -0.32
Trove2O08848 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.06□□□□□ -0.32
Trove2O08848 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.06□□□□□ -0.32
Trove2O08848 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.06□□□□□ -0.32
Trove2O08848 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.06□□□□□ -0.32
Trove2O08848 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trove2O08848 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trove2O08848 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trove2O08848 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trove2O08848 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trove2O08848 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.05□□□□□ -0.32
Trove2O08848 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trove2O08848 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.05□□□□□ -0.32
Trove2O08848 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trove2O08848 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trove2O08848 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trove2O08848 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trove2O08848 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trove2O08848 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.05□□□□□ -0.32
Trove2O08848 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms