Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tcof1O08784 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.87□□□□□ -0.03
Tcof1O08784 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tcof1O08784 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tcof1O08784 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tcof1O08784 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tcof1O08784 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tcof1O08784 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tcof1O08784 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Tcof1O08784 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Tcof1O08784 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tcof1O08784 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.86□□□□□ -0.03
Tcof1O08784 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Tcof1O08784 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Tcof1O08784 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.86□□□□□ -0.03
Tcof1O08784 Gm5904-201ENSMUST00000210286 865 ntBASIC14.86□□□□□ -0.03
Tcof1O08784 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.86□□□□□ -0.03
Tcof1O08784 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.86□□□□□ -0.03
Tcof1O08784 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tcof1O08784 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.86□□□□□ -0.03
Tcof1O08784 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Tcof1O08784 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.86□□□□□ -0.03
Tcof1O08784 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tcof1O08784 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Tcof1O08784 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tcof1O08784 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Tcof1O08784 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Tcof1O08784 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Tcof1O08784 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tcof1O08784 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tcof1O08784 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tcof1O08784 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.85□□□□□ -0.03
Tcof1O08784 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tcof1O08784 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.85□□□□□ -0.03
Tcof1O08784 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Tcof1O08784 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Tcof1O08784 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tcof1O08784 Gm25214-201ENSMUST00000104573 129 ntBASIC14.85□□□□□ -0.03
Tcof1O08784 Mir877-201ENSMUST00000104738 85 ntBASIC14.85□□□□□ -0.03
Tcof1O08784 Gm13736-201ENSMUST00000119272 253 ntBASIC14.85□□□□□ -0.03
Tcof1O08784 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.85□□□□□ -0.03
Tcof1O08784 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.85□□□□□ -0.03
Tcof1O08784 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Tcof1O08784 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tcof1O08784 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.85□□□□□ -0.03
Tcof1O08784 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.85□□□□□ -0.03
Tcof1O08784 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.85□□□□□ -0.03
Tcof1O08784 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.85□□□□□ -0.03
Tcof1O08784 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.85□□□□□ -0.03
Tcof1O08784 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tcof1O08784 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tcof1O08784 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tcof1O08784 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tcof1O08784 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Tcof1O08784 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Tcof1O08784 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.84□□□□□ -0.03
Tcof1O08784 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Tcof1O08784 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.84□□□□□ -0.03
Tcof1O08784 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Tcof1O08784 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Tcof1O08784 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.84□□□□□ -0.03
Tcof1O08784 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Gm10434-201ENSMUST00000101158 471 ntBASIC14.84□□□□□ -0.03
Tcof1O08784 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.84□□□□□ -0.03
Tcof1O08784 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.84□□□□□ -0.03
Tcof1O08784 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.84□□□□□ -0.03
Tcof1O08784 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.84□□□□□ -0.03
Tcof1O08784 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.84□□□□□ -0.03
Tcof1O08784 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tcof1O08784 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms