Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Gm14350-201ENSMUST00000116642 640 ntBASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shisa8J3QNX5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms