Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gm11930-201ENSMUST00000117788 190 ntBASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gm11978-201ENSMUST00000122315 466 ntBASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gm27552-201ENSMUST00000183351 62 ntBASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gm27844-201ENSMUST00000183613 62 ntBASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gm8894-201ENSMUST00000074642 666 ntBASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syngap1F6SEU4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Syngap1F6SEU4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Gm37905-201ENSMUST00000195310 341 ntBASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Gm32025-201ENSMUST00000217960 307 ntBASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Syngap1F6SEU4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Syngap1F6SEU4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Syngap1F6SEU4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.27□□□□□ -0.13
Syngap1F6SEU4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Syngap1F6SEU4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms