Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
R3hdm1E9Q9Q2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Gm13611-201ENSMUST00000118269 318 ntBASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
R3hdm1E9Q9Q2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
R3hdm1E9Q9Q2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
R3hdm1E9Q9Q2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
R3hdm1E9Q9Q2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.02□□□□□ -0.16
R3hdm1E9Q9Q2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
R3hdm1E9Q9Q2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.02□□□□□ -0.16
R3hdm1E9Q9Q2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.02□□□□□ -0.16
R3hdm1E9Q9Q2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.02□□□□□ -0.16
R3hdm1E9Q9Q2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
R3hdm1E9Q9Q2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
R3hdm1E9Q9Q2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
R3hdm1E9Q9Q2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Gm14109-201ENSMUST00000118814 309 ntBASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
R3hdm1E9Q9Q2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.01□□□□□ -0.17
R3hdm1E9Q9Q2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
R3hdm1E9Q9Q2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
R3hdm1E9Q9Q2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
R3hdm1E9Q9Q2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
R3hdm1E9Q9Q2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
R3hdm1E9Q9Q2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
R3hdm1E9Q9Q2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms