Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf11E9PZM7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Scaf11E9PZM7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gm16166-201ENSMUST00000118291 787 ntBASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gm9025-201ENSMUST00000122415 1575 ntBASIC17.44■□□□□ 0.38
Scaf11E9PZM7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Matn2-206ENSMUST00000228570 2798 ntBASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gm15352-201ENSMUST00000118696 270 ntBASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gm4862-201ENSMUST00000170405 438 ntBASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gm23045-201ENSMUST00000175041 96 ntBASIC17.44■□□□□ 0.38
Scaf11E9PZM7 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC17.44■□□□□ 0.38
Scaf11E9PZM7 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gm43186-201ENSMUST00000198130 824 ntBASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf11E9PZM7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Gm37458-201ENSMUST00000194055 410 ntBASIC17.43■□□□□ 0.38
Scaf11E9PZM7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 CT025553.1-201ENSMUST00000226292 299 ntBASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf11E9PZM7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Gm9361-201ENSMUST00000198695 1507 ntBASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms