Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Mir7088-201ENSMUST00000184227 86 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gm38233-201ENSMUST00000194259 807 ntBASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gm23595-201ENSMUST00000104306 130 ntBASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gm15196-201ENSMUST00000121406 482 ntBASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gm37207-201ENSMUST00000194284 296 ntBASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gm43249-201ENSMUST00000200464 458 ntBASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gm6423-201ENSMUST00000204315 934 ntBASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a3E9PWQ3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm23132-201ENSMUST00000104254 132 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm8815-201ENSMUST00000173809 620 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm5205-201ENSMUST00000182253 1003 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm28686-201ENSMUST00000187404 609 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm43852-201ENSMUST00000202098 917 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm13039-201ENSMUST00000118638 794 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm14942-201ENSMUST00000119642 336 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm43866-201ENSMUST00000203894 839 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm7727-201ENSMUST00000219830 671 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 AC165260.3-201ENSMUST00000225101 665 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms