Protein–RNA interactions for Protein: B2RV38

Rd3l, BC048943 protein, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3lB2RV38 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.11□□□□□ -0.63
Rd3lB2RV38 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.11□□□□□ -0.63
Rd3lB2RV38 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.11□□□□□ -0.63
Rd3lB2RV38 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rd3lB2RV38 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Gm42550-201ENSMUST00000201553 960 ntBASIC11.1□□□□□ -0.63
Rd3lB2RV38 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Gm24447-201ENSMUST00000083977 338 ntBASIC11.1□□□□□ -0.63
Rd3lB2RV38 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.1□□□□□ -0.63
Rd3lB2RV38 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Rd3lB2RV38 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rd3lB2RV38 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms