Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp42B2RQC2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Usp42B2RQC2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Usp42B2RQC2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Usp42B2RQC2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.83□□□□□ -0.04
Usp42B2RQC2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp42B2RQC2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Usp42B2RQC2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.82□□□□□ -0.04
Usp42B2RQC2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Gm13875-201ENSMUST00000120162 282 ntBASIC14.82□□□□□ -0.04
Usp42B2RQC2 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.82□□□□□ -0.04
Usp42B2RQC2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Gm42627-201ENSMUST00000197347 224 ntBASIC14.82□□□□□ -0.04
Usp42B2RQC2 Gm43630-201ENSMUST00000201550 776 ntBASIC14.82□□□□□ -0.04
Usp42B2RQC2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp42B2RQC2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.81□□□□□ -0.04
Usp42B2RQC2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Gm13342-201ENSMUST00000121055 207 ntBASIC14.81□□□□□ -0.04
Usp42B2RQC2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Mospd4-201ENSMUST00000180618 576 ntBASIC14.81□□□□□ -0.04
Usp42B2RQC2 Gm43438-201ENSMUST00000198133 379 ntBASIC14.81□□□□□ -0.04
Usp42B2RQC2 Gm6013-201ENSMUST00000212264 699 ntBASIC14.81□□□□□ -0.04
Usp42B2RQC2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Gm7046-201ENSMUST00000221351 977 ntBASIC14.81□□□□□ -0.04
Usp42B2RQC2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Usp42B2RQC2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms