Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Mir686-201ENSMUST00000102174 109 ntBASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Mir449b-201ENSMUST00000104833 80 ntBASIC10.25□□□□□ -0.77
Gm12887B1AVM1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Gm13813-201ENSMUST00000120998 787 ntBASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm12887B1AVM1 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.25□□□□□ -0.77
Gm12887B1AVM1 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm12887B1AVM1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms