Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm13045-201ENSMUST00000119019 712 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm29615-201ENSMUST00000185371 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm28224-201ENSMUST00000186078 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm29001-201ENSMUST00000186177 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm28292-201ENSMUST00000186593 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm28101-201ENSMUST00000187608 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm29076-201ENSMUST00000187689 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm28302-201ENSMUST00000187931 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm28646-201ENSMUST00000188220 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm28205-201ENSMUST00000189177 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm29032-201ENSMUST00000189797 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm28695-201ENSMUST00000190300 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm37448-201ENSMUST00000192795 697 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm18730-201ENSMUST00000218038 343 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 CT025551.1-201ENSMUST00000223996 692 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.71□□□□□ -0.69
Col6a4A2AX52 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Gm6407-201ENSMUST00000176468 549 ntBASIC10.71□□□□□ -0.69
Col6a4A2AX52 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.71□□□□□ -0.69
Col6a4A2AX52 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.71□□□□□ -0.69
Col6a4A2AX52 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.71□□□□□ -0.69
Col6a4A2AX52 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.71□□□□□ -0.69
Col6a4A2AX52 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.71□□□□□ -0.69
Col6a4A2AX52 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a4A2AX52 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a4A2AX52 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Gm38092-201ENSMUST00000195600 653 ntBASIC10.7□□□□□ -0.7
Col6a4A2AX52 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.7□□□□□ -0.7
Col6a4A2AX52 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.7□□□□□ -0.7
Col6a4A2AX52 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a4A2AX52 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms