Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Gm12341-201ENSMUST00000119724 503 ntBASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Gm12151-201ENSMUST00000121374 290 ntBASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Gm6152-201ENSMUST00000151704 340 ntBASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Gm42612-201ENSMUST00000197986 623 ntBASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Gm43170-201ENSMUST00000199827 612 ntBASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav12d-1A0N8R0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav12d-1A0N8R0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Gm14760-201ENSMUST00000121831 999 ntBASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Gm35960-201ENSMUST00000202712 767 ntBASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Gm18473-201ENSMUST00000220543 868 ntBASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav12d-1A0N8R0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms