Protein–RNA interactions for Protein: T1NXB5

Vstm4, V-set and transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vstm4T1NXB5 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.76□□□□□ -0.21
Vstm4T1NXB5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Gm6152-201ENSMUST00000151704 340 ntBASIC13.75□□□□□ -0.21
Vstm4T1NXB5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Mir7654-201ENSMUST00000185082 70 ntBASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Gm16372-201ENSMUST00000073088 450 ntBASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vstm4T1NXB5 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Rubie-203ENSMUST00000227803 2430 ntBASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Gm15429-201ENSMUST00000151268 798 ntBASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Gm6218-201ENSMUST00000219812 628 ntBASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vstm4T1NXB5 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms