Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.83□□□□□ -0.03
Scn11aQ9R053 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.83□□□□□ -0.03
Scn11aQ9R053 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scn11aQ9R053 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scn11aQ9R053 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.83□□□□□ -0.03
Scn11aQ9R053 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scn11aQ9R053 Mir6546-201ENSMUST00000184460 62 ntBASIC14.83□□□□□ -0.03
Scn11aQ9R053 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.83□□□□□ -0.03
Scn11aQ9R053 Gm43916-201ENSMUST00000205062 967 ntBASIC14.83□□□□□ -0.03
Scn11aQ9R053 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.83□□□□□ -0.03
Scn11aQ9R053 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.83□□□□□ -0.03
Scn11aQ9R053 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Scn11aQ9R053 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scn11aQ9R053 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Scn11aQ9R053 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.83□□□□□ -0.04
Scn11aQ9R053 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Scn11aQ9R053 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Gm11509-201ENSMUST00000117358 325 ntBASIC14.83□□□□□ -0.04
Scn11aQ9R053 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.83□□□□□ -0.04
Scn11aQ9R053 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn11aQ9R053 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.82□□□□□ -0.04
Scn11aQ9R053 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Gm25880-201ENSMUST00000104331 132 ntBASIC14.82□□□□□ -0.04
Scn11aQ9R053 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Gm15711-201ENSMUST00000118889 535 ntBASIC14.82□□□□□ -0.04
Scn11aQ9R053 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.82□□□□□ -0.04
Scn11aQ9R053 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.82□□□□□ -0.04
Scn11aQ9R053 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn11aQ9R053 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.81□□□□□ -0.04
Scn11aQ9R053 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.81□□□□□ -0.04
Scn11aQ9R053 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.81□□□□□ -0.04
Scn11aQ9R053 Gm18038-201ENSMUST00000197900 485 ntBASIC14.81□□□□□ -0.04
Scn11aQ9R053 Gm44882-201ENSMUST00000205702 802 ntBASIC14.81□□□□□ -0.04
Scn11aQ9R053 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.81□□□□□ -0.04
Scn11aQ9R053 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.81□□□□□ -0.04
Scn11aQ9R053 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms