Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup50Q9JIH2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nup50Q9JIH2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup50Q9JIH2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup50Q9JIH2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup50Q9JIH2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup50Q9JIH2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup50Q9JIH2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup50Q9JIH2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.43□□□□□ -0.26
Nup50Q9JIH2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup50Q9JIH2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Gm12138-201ENSMUST00000122180 951 ntBASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Gm26185-201ENSMUST00000157692 266 ntBASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Gm4271-201ENSMUST00000174444 973 ntBASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Gm17794-201ENSMUST00000220252 955 ntBASIC13.42□□□□□ -0.26
Nup50Q9JIH2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Gm5356-201ENSMUST00000093326 615 ntBASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup50Q9JIH2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Gm7029-201ENSMUST00000173226 450 ntBASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Gm27892-201ENSMUST00000185017 106 ntBASIC13.41□□□□□ -0.26
Nup50Q9JIH2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Gm38092-201ENSMUST00000195600 653 ntBASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup50Q9JIH2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup50Q9JIH2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup50Q9JIH2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup50Q9JIH2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms