Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube3bQ9ES34 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube3bQ9ES34 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube3bQ9ES34 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube3bQ9ES34 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.12■□□□□ 0.01
Ube3bQ9ES34 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube3bQ9ES34 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube3bQ9ES34 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube3bQ9ES34 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube3bQ9ES34 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube3bQ9ES34 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ube3bQ9ES34 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Gm25668-201ENSMUST00000157700 129 ntBASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Gm26083-201ENSMUST00000157904 193 ntBASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube3bQ9ES34 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Gm11930-201ENSMUST00000117788 190 ntBASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Gm15547-201ENSMUST00000122152 333 ntBASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Gm27243-201ENSMUST00000183964 521 ntBASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Gm38241-201ENSMUST00000192641 898 ntBASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Gm8712-201ENSMUST00000221090 701 ntBASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ube3bQ9ES34 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Gm14760-201ENSMUST00000121831 999 ntBASIC15.09■□□□□ 0.01
Ube3bQ9ES34 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Gm18304-201ENSMUST00000189162 546 ntBASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Gm4857-201ENSMUST00000192718 785 ntBASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Gm6082-201ENSMUST00000215204 454 ntBASIC15.09■□□□□ 0.01
Ube3bQ9ES34 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ube3bQ9ES34 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.09■□□□□ 0.01
Ube3bQ9ES34 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms