Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ripk4Q9ERK0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ripk4Q9ERK0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ripk4Q9ERK0 Gm4780-202ENSMUST00000215200 2644 ntBASIC15.55■□□□□ 0.08
Ripk4Q9ERK0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ripk4Q9ERK0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ripk4Q9ERK0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ripk4Q9ERK0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ripk4Q9ERK0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ripk4Q9ERK0 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.55■□□□□ 0.08
Ripk4Q9ERK0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ripk4Q9ERK0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Gm26956-201ENSMUST00000182176 986 ntBASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Gm18827-201ENSMUST00000188341 790 ntBASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ripk4Q9ERK0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Gm5904-201ENSMUST00000210286 865 ntBASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Gm32025-201ENSMUST00000217960 307 ntBASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ripk4Q9ERK0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Mir874-201ENSMUST00000104769 76 ntBASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms