Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Gm13392-201ENSMUST00000117708 150 ntBASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Gm5370-201ENSMUST00000187187 574 ntBASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Gm10478-201ENSMUST00000084451 396 ntBASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Gm6447-201ENSMUST00000118905 835 ntBASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Gm16177-201ENSMUST00000120728 718 ntBASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Gm6007-201ENSMUST00000208170 823 ntBASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubb3Q9ERD7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms