Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2aQ9DB34 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2aQ9DB34 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Chmp2aQ9DB34 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2aQ9DB34 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Chmp2aQ9DB34 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2aQ9DB34 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chmp2aQ9DB34 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chmp2aQ9DB34 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Gm37424-201ENSMUST00000191727 561 ntBASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Gm37008-201ENSMUST00000195712 319 ntBASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Gm45880-201ENSMUST00000213041 853 ntBASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp2aQ9DB34 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp2aQ9DB34 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Chmp2aQ9DB34 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2aQ9DB34 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2aQ9DB34 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2aQ9DB34 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.27□□□□□ -0.28
Chmp2aQ9DB34 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2aQ9DB34 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2aQ9DB34 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp2aQ9DB34 Gm23931-201ENSMUST00000103842 109 ntBASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Gm22121-201ENSMUST00000175148 54 ntBASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Gm32025-201ENSMUST00000217960 307 ntBASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms