Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Gm4804-201ENSMUST00000182234 999 ntBASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Gm29608-201ENSMUST00000190444 463 ntBASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Gm18206-201ENSMUST00000207027 926 ntBASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Gm5779-201ENSMUST00000218467 910 ntBASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Gm9229-201ENSMUST00000222777 126 ntBASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Mzt1-203ENSMUST00000227948 952 ntBASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Gm14494-201ENSMUST00000118786 435 ntBASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.85□□□□□ -0.35
Sf3a3Q9D554 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.85□□□□□ -0.35
Sf3a3Q9D554 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Gm10175-201ENSMUST00000086013 645 ntBASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.85□□□□□ -0.35
Sf3a3Q9D554 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sf3a3Q9D554 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Gm8410-201ENSMUST00000117225 605 ntBASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Gm17330-201ENSMUST00000221047 165 ntBASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms