Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Gm4760-201ENSMUST00000119663 1030 ntBASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Gm27023-201ENSMUST00000182372 285 ntBASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.17■□□□□ 0.02
Stag1Q9D3E6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Gm11439-201ENSMUST00000118598 409 ntBASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Gm26361-201ENSMUST00000158868 186 ntBASIC15.16■□□□□ 0.02
Stag1Q9D3E6 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Gm27341-201ENSMUST00000183570 106 ntBASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Gm18753-201ENSMUST00000201000 566 ntBASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.16■□□□□ 0.02
Stag1Q9D3E6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.15■□□□□ 0.02
Stag1Q9D3E6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Gstp-ps-201ENSMUST00000195526 631 ntBASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stag1Q9D3E6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms