Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim13Q9CYB0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim13Q9CYB0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Gm15376-201ENSMUST00000122258 783 ntBASIC11.77□□□□□ -0.53
Trim13Q9CYB0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Gm19078-201ENSMUST00000206311 727 ntBASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.77□□□□□ -0.53
Trim13Q9CYB0 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim13Q9CYB0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm6447-201ENSMUST00000118905 835 ntBASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm11524-201ENSMUST00000119349 807 ntBASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm20949-201ENSMUST00000206478 952 ntBASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms