Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Gm13123-201ENSMUST00000122173 492 ntBASIC14.94□□□□□ -0.02
Smc3Q9CW03 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.94□□□□□ -0.02
Smc3Q9CW03 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Auts2-212ENSMUST00000178555 309 ntBASIC14.94□□□□□ -0.02
Smc3Q9CW03 Gm8598-201ENSMUST00000221184 836 ntBASIC14.94□□□□□ -0.02
Smc3Q9CW03 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smc3Q9CW03 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Smc3Q9CW03 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.93□□□□□ -0.02
Smc3Q9CW03 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.93□□□□□ -0.02
Smc3Q9CW03 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Gm14704-201ENSMUST00000120300 874 ntBASIC14.93□□□□□ -0.02
Smc3Q9CW03 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Gm44124-201ENSMUST00000204159 472 ntBASIC14.93□□□□□ -0.02
Smc3Q9CW03 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.93□□□□□ -0.02
Smc3Q9CW03 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.93□□□□□ -0.02
Smc3Q9CW03 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Smc3Q9CW03 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Proscos-202ENSMUST00000178990 666 ntBASIC14.92□□□□□ -0.02
Smc3Q9CW03 Gm18018-201ENSMUST00000198273 408 ntBASIC14.92□□□□□ -0.02
Smc3Q9CW03 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.92□□□□□ -0.02
Smc3Q9CW03 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.92□□□□□ -0.02
Smc3Q9CW03 Gm26035-201ENSMUST00000083065 308 ntBASIC14.92□□□□□ -0.02
Smc3Q9CW03 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.92□□□□□ -0.02
Smc3Q9CW03 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.92□□□□□ -0.02
Smc3Q9CW03 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.92□□□□□ -0.02
Smc3Q9CW03 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.92□□□□□ -0.02
Smc3Q9CW03 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.92□□□□□ -0.02
Smc3Q9CW03 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.92□□□□□ -0.02
Smc3Q9CW03 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smc3Q9CW03 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Smc3Q9CW03 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smc3Q9CW03 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smc3Q9CW03 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc3Q9CW03 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smc3Q9CW03 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms