Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Gm11918-201ENSMUST00000121660 179 ntBASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Gm23363-201ENSMUST00000175024 79 ntBASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Gm6180-201ENSMUST00000065243 498 ntBASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H2afb1Q9CQ70 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm9630-201ENSMUST00000178304 885 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm37497-201ENSMUST00000195830 798 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm26035-201ENSMUST00000083065 308 ntBASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
H2afb1Q9CQ70 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms