Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Krt88Q9CPR6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Cog3-203ENSMUST00000227473 4197 ntBASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt88Q9CPR6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Gm13813-201ENSMUST00000120998 787 ntBASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Gm5279-201ENSMUST00000199575 745 ntBASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt88Q9CPR6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms