Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Gm5354-201ENSMUST00000182417 973 ntBASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.48□□□□□ -0.41
Trim8Q99PJ2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim8Q99PJ2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Mir686-201ENSMUST00000102174 109 ntBASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim8Q99PJ2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms