Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm7985-201ENSMUST00000183329 981 ntBASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.59□□□□□ -0.39
Cdh23Q99PF4 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.59□□□□□ -0.39
Cdh23Q99PF4 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Gm16380-201ENSMUST00000077997 478 ntBASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Cdh23Q99PF4 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cdh23Q99PF4 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.58□□□□□ -0.39
Cdh23Q99PF4 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.58□□□□□ -0.39
Cdh23Q99PF4 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.58□□□□□ -0.39
Cdh23Q99PF4 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.58□□□□□ -0.39
Cdh23Q99PF4 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.58□□□□□ -0.39
Cdh23Q99PF4 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.58□□□□□ -0.39
Cdh23Q99PF4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Gm3551-201ENSMUST00000190750 664 ntBASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.58□□□□□ -0.4
Cdh23Q99PF4 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms