Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Gm14921-201ENSMUST00000118643 908 ntBASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Gm11803-201ENSMUST00000119966 444 ntBASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Mir1894-201ENSMUST00000122802 81 ntBASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Gm5356-201ENSMUST00000093326 615 ntBASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cstf3Q99LI7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Gm11637-201ENSMUST00000120601 592 ntBASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.3□□□□□ -0.44
Cstf3Q99LI7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Gm17794-201ENSMUST00000220252 955 ntBASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms