Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.64■□□□□ 0.09
RtcbQ99LF4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.64■□□□□ 0.09
RtcbQ99LF4 Gm15703-201ENSMUST00000120250 880 ntBASIC15.64■□□□□ 0.09
RtcbQ99LF4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.64■□□□□ 0.09
RtcbQ99LF4 Gm14460-201ENSMUST00000121511 639 ntBASIC15.64■□□□□ 0.09
RtcbQ99LF4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC15.64■□□□□ 0.09
RtcbQ99LF4 Gm7600-201ENSMUST00000209657 785 ntBASIC15.64■□□□□ 0.09
RtcbQ99LF4 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.64■□□□□ 0.09
RtcbQ99LF4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.63■□□□□ 0.09
RtcbQ99LF4 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.63■□□□□ 0.09
RtcbQ99LF4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.63■□□□□ 0.09
RtcbQ99LF4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.63■□□□□ 0.09
RtcbQ99LF4 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.63■□□□□ 0.09
RtcbQ99LF4 Gm8365-201ENSMUST00000197334 648 ntBASIC15.63■□□□□ 0.09
RtcbQ99LF4 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
RtcbQ99LF4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
RtcbQ99LF4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
RtcbQ99LF4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Gm12196-201ENSMUST00000120954 262 ntBASIC15.62■□□□□ 0.09
RtcbQ99LF4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Mir6546-201ENSMUST00000184460 62 ntBASIC15.62■□□□□ 0.09
RtcbQ99LF4 Gm4482-201ENSMUST00000200876 742 ntBASIC15.62■□□□□ 0.09
RtcbQ99LF4 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RtcbQ99LF4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms