Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Gm14127-201ENSMUST00000117906 678 ntBASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Gm24196-201ENSMUST00000179161 110 ntBASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Gm16372-201ENSMUST00000073088 450 ntBASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmp1Q99KU0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Gm8213-201ENSMUST00000118191 441 ntBASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Gm8598-201ENSMUST00000221184 836 ntBASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Gm10012-201ENSMUST00000078252 192 ntBASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmp1Q99KU0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vmp1Q99KU0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vmp1Q99KU0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmp1Q99KU0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Vmp1Q99KU0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vmp1Q99KU0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms