Protein–RNA interactions for Protein: Q99J59

Tspan1, Tetraspanin-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan1Q99J59 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.68□□□□□ -0.38
Tspan1Q99J59 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tspan1Q99J59 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tspan1Q99J59 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.67□□□□□ -0.38
Tspan1Q99J59 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.67□□□□□ -0.38
Tspan1Q99J59 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Gm13786-201ENSMUST00000122371 333 ntBASIC12.67□□□□□ -0.38
Tspan1Q99J59 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Mir1938-201ENSMUST00000158746 100 ntBASIC12.67□□□□□ -0.38
Tspan1Q99J59 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Gm8018-201ENSMUST00000173536 789 ntBASIC12.67□□□□□ -0.38
Tspan1Q99J59 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.67□□□□□ -0.38
Tspan1Q99J59 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Tspan1Q99J59 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.67□□□□□ -0.38
Tspan1Q99J59 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tspan1Q99J59 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.66□□□□□ -0.38
Tspan1Q99J59 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Gm22058-201ENSMUST00000083393 310 ntBASIC12.66□□□□□ -0.38
Tspan1Q99J59 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.66□□□□□ -0.38
Tspan1Q99J59 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tspan1Q99J59 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms