Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b3Q921M3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Gm24934-201ENSMUST00000103764 111 ntBASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Spcs1-203ENSMUST00000226374 592 ntBASIC15.22■□□□□ 0.03
Sf3b3Q921M3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sf3b3Q921M3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Gm11989-201ENSMUST00000117240 672 ntBASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Gm11362-201ENSMUST00000118838 850 ntBASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Gm11450-201ENSMUST00000121144 333 ntBASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Gm29787-201ENSMUST00000222129 849 ntBASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b3Q921M3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b3Q921M3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Sf3b3Q921M3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b3Q921M3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b3Q921M3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b3Q921M3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b3Q921M3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b3Q921M3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b3Q921M3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Gm9062-201ENSMUST00000117712 727 ntBASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Gm15515-201ENSMUST00000117827 822 ntBASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Gm14760-201ENSMUST00000121831 999 ntBASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms