Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Gm27682-201ENSMUST00000183930 110 ntBASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Gm6458-201ENSMUST00000211573 635 ntBASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Gm10146-201ENSMUST00000072739 309 ntBASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Gm26185-201ENSMUST00000157692 266 ntBASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Gm27514-201ENSMUST00000183692 110 ntBASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Gm28693-202ENSMUST00000190758 331 ntBASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Gm43438-201ENSMUST00000198133 379 ntBASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhga4Q91XY4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms