Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Grk6-205ENSMUST00000224653 2976 ntBASIC14.55□□□□□ -0.08
Trex1Q91XB0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.54□□□□□ -0.08
Trex1Q91XB0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Rmrp-201ENSMUST00000157463 271 ntBASIC14.54□□□□□ -0.08
Trex1Q91XB0 Gm24749-201ENSMUST00000157838 343 ntBASIC14.54□□□□□ -0.08
Trex1Q91XB0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Gm45433-201ENSMUST00000209386 247 ntBASIC14.54□□□□□ -0.08
Trex1Q91XB0 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.54□□□□□ -0.08
Trex1Q91XB0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trex1Q91XB0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trex1Q91XB0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.54□□□□□ -0.08
Trex1Q91XB0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.54□□□□□ -0.08
Trex1Q91XB0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Gm32999-201ENSMUST00000192693 562 ntBASIC14.53□□□□□ -0.08
Trex1Q91XB0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trex1Q91XB0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trex1Q91XB0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Gm45598-202ENSMUST00000210719 986 ntBASIC14.52□□□□□ -0.09
Trex1Q91XB0 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms