Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Gm7809-201ENSMUST00000153199 742 ntBASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Gm5370-201ENSMUST00000187187 574 ntBASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Gm37424-201ENSMUST00000191727 561 ntBASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 AY702102-202ENSMUST00000194651 1173 ntBASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Gm19324-201ENSMUST00000213229 1169 ntBASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb11Q91UZ8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Gm22018-201ENSMUST00000104357 131 ntBASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Gm5187-201ENSMUST00000117317 991 ntBASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Gm3890-201ENSMUST00000182416 207 ntBASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Gm18584-201ENSMUST00000203098 964 ntBASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.03□□□□□ -0.32
Pcdhb11Q91UZ8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb11Q91UZ8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.02□□□□□ -0.32
Pcdhb11Q91UZ8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb11Q91UZ8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb11Q91UZ8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb11Q91UZ8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb11Q91UZ8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb11Q91UZ8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb11Q91UZ8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb11Q91UZ8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdhb11Q91UZ8 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms