Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Gm27321-201ENSMUST00000185021 205 ntBASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.87□□□□□ -0.35
Rpa1Q8VEE4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Gm6447-201ENSMUST00000118905 835 ntBASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rpa1Q8VEE4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms