Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retreg1dQ8VE91 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gm11637-201ENSMUST00000120601 592 ntBASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gm12363-201ENSMUST00000122250 668 ntBASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gm27501-201ENSMUST00000183599 107 ntBASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gm43118-201ENSMUST00000199149 775 ntBASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gm45930-201ENSMUST00000221330 292 ntBASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Retreg1dQ8VE91 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg1dQ8VE91 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg1dQ8VE91 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retreg1dQ8VE91 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms