Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm5687-201ENSMUST00000118252 640 ntBASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm11814-201ENSMUST00000119515 929 ntBASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm27486-201ENSMUST00000184923 80 ntBASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm18187-201ENSMUST00000196476 984 ntBASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Itm2b-204ENSMUST00000228637 783 ntBASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf8Q8VC56 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.3□□□□□ -0.44
Rnf8Q8VC56 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf8Q8VC56 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf8Q8VC56 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms