Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Gm11637-201ENSMUST00000120601 592 ntBASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Gm5356-201ENSMUST00000093326 615 ntBASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps39Q8R5L3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Mir1894-201ENSMUST00000122802 81 ntBASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Gm26185-201ENSMUST00000157692 266 ntBASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Gm8099-201ENSMUST00000200510 742 ntBASIC12.74□□□□□ -0.37
Vps39Q8R5L3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.74□□□□□ -0.37
Vps39Q8R5L3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps39Q8R5L3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Gm14704-201ENSMUST00000120300 874 ntBASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms