Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup85Q8R480 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup85Q8R480 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup85Q8R480 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup85Q8R480 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup85Q8R480 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Nup85Q8R480 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup85Q8R480 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup85Q8R480 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup85Q8R480 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup85Q8R480 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup85Q8R480 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.11□□□□□ -0.31
Nup85Q8R480 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup85Q8R480 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup85Q8R480 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nup85Q8R480 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nup85Q8R480 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nup85Q8R480 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.1□□□□□ -0.31
Nup85Q8R480 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.1□□□□□ -0.31
Nup85Q8R480 Gm19184-201ENSMUST00000196798 928 ntBASIC13.1□□□□□ -0.31
Nup85Q8R480 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.1□□□□□ -0.31
Nup85Q8R480 Gm18054-201ENSMUST00000207539 555 ntBASIC13.1□□□□□ -0.31
Nup85Q8R480 Gm6013-201ENSMUST00000212264 699 ntBASIC13.1□□□□□ -0.31
Nup85Q8R480 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nup85Q8R480 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.1□□□□□ -0.31
Nup85Q8R480 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nup85Q8R480 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.1□□□□□ -0.31
Nup85Q8R480 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nup85Q8R480 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Nup85Q8R480 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.1□□□□□ -0.31
Nup85Q8R480 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup85Q8R480 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nup85Q8R480 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.09□□□□□ -0.31
Nup85Q8R480 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.09□□□□□ -0.31
Nup85Q8R480 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.09□□□□□ -0.31
Nup85Q8R480 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.09□□□□□ -0.31
Nup85Q8R480 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Pck2-205ENSMUST00000226352 2784 ntBASIC13.09□□□□□ -0.31
Nup85Q8R480 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.09□□□□□ -0.31
Nup85Q8R480 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Gm7399-201ENSMUST00000032395 858 ntBASIC13.09□□□□□ -0.31
Nup85Q8R480 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nup85Q8R480 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup85Q8R480 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup85Q8R480 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup85Q8R480 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Nup85Q8R480 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup85Q8R480 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup85Q8R480 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms