Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Gm13392-201ENSMUST00000117708 150 ntBASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sf3a1Q8K4Z5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sf3a1Q8K4Z5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Sf3a1Q8K4Z5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sf3a1Q8K4Z5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sf3a1Q8K4Z5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sf3a1Q8K4Z5 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sf3a1Q8K4Z5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sf3a1Q8K4Z5 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Gm12502-201ENSMUST00000120197 444 ntBASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Gm16296-201ENSMUST00000159905 325 ntBASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Gm17420-201ENSMUST00000164753 153 ntBASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Gm8738-201ENSMUST00000172606 329 ntBASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Gm38002-201ENSMUST00000193255 180 ntBASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sf3a1Q8K4Z5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Gm18054-201ENSMUST00000207539 555 ntBASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms