Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CopaQ8CIE6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Mir686-201ENSMUST00000102174 109 ntBASIC13.02□□□□□ -0.33
CopaQ8CIE6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.02□□□□□ -0.33
CopaQ8CIE6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.02□□□□□ -0.33
CopaQ8CIE6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.02□□□□□ -0.33
CopaQ8CIE6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
CopaQ8CIE6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.01□□□□□ -0.33
CopaQ8CIE6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Mir7221-201ENSMUST00000184009 72 ntBASIC13.01□□□□□ -0.33
CopaQ8CIE6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.01□□□□□ -0.33
CopaQ8CIE6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CopaQ8CIE6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CopaQ8CIE6 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13□□□□□ -0.33
CopaQ8CIE6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13□□□□□ -0.33
CopaQ8CIE6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CopaQ8CIE6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms