Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Mir1894-201ENSMUST00000122802 81 ntBASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Gm22121-201ENSMUST00000175148 54 ntBASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc38Q8CDN8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Gm45532-201ENSMUST00000210342 3620 ntBASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Gm12203-201ENSMUST00000118235 598 ntBASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Gm12209-201ENSMUST00000120089 596 ntBASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Gm12138-201ENSMUST00000122180 951 ntBASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc38Q8CDN8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Gm2231-201ENSMUST00000125661 612 ntBASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Gm37042-201ENSMUST00000193816 581 ntBASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms