Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Gm43433-201ENSMUST00000196573 481 ntBASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lrif1Q8CDD9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lrif1Q8CDD9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Lrif1Q8CDD9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lrif1Q8CDD9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.58□□□□□ -0.39
Lrif1Q8CDD9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lrif1Q8CDD9 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lrif1Q8CDD9 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms