Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps53Q8CCB4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Gm25927-201ENSMUST00000175058 117 ntBASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.84□□□□□ -0.03
Vps53Q8CCB4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps53Q8CCB4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Vps53Q8CCB4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps53Q8CCB4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Mir686-201ENSMUST00000102174 109 ntBASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Gm12241-201ENSMUST00000118330 726 ntBASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Gm16570-201ENSMUST00000161951 436 ntBASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Gm38341-201ENSMUST00000195357 515 ntBASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Olfr284-202ENSMUST00000206647 966 ntBASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps53Q8CCB4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms