Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Gm22189-201ENSMUST00000103822 86 ntBASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Gm15487-201ENSMUST00000122373 465 ntBASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Gm5354-201ENSMUST00000182417 973 ntBASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Mir339-201ENSMUST00000083659 96 ntBASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lysmd4Q8CC84 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lysmd4Q8CC84 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lysmd4Q8CC84 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lysmd4Q8CC84 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lysmd4Q8CC84 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Gm14719-201ENSMUST00000121891 340 ntBASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Gm28760-201ENSMUST00000185995 736 ntBASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
Lysmd4Q8CC84 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms