Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.02□□□□□ -0.17
Trim9Q8C7M3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.02□□□□□ -0.17
Trim9Q8C7M3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Snora73a-201ENSMUST00000082453 205 ntBASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Gm25927-201ENSMUST00000175058 117 ntBASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.01□□□□□ -0.17
Trim9Q8C7M3 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim9Q8C7M3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Gm43823-201ENSMUST00000197391 1808 ntBASIC14□□□□□ -0.17
Trim9Q8C7M3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14□□□□□ -0.17
Trim9Q8C7M3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14□□□□□ -0.17
Trim9Q8C7M3 Gm13829-201ENSMUST00000119600 138 ntBASIC14□□□□□ -0.17
Trim9Q8C7M3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trim9Q8C7M3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Gm25261-201ENSMUST00000157416 134 ntBASIC14□□□□□ -0.17
Trim9Q8C7M3 Gm45784-201ENSMUST00000188360 142 ntBASIC14□□□□□ -0.17
Trim9Q8C7M3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14□□□□□ -0.17
Trim9Q8C7M3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim9Q8C7M3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim9Q8C7M3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Gm37827-201ENSMUST00000194486 1542 ntBASIC14□□□□□ -0.17
Trim9Q8C7M3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim9Q8C7M3 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms