Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 AY036118-201ENSMUST00000200021 923 ntBASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Gm270-201ENSMUST00000223010 976 ntBASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Gzmn-202ENSMUST00000225535 989 ntBASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a6Q8C6K9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a6Q8C6K9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Gm12314-201ENSMUST00000118104 538 ntBASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Gm1821-202ENSMUST00000227415 750 ntBASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Mir339-201ENSMUST00000083659 96 ntBASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Cog3-203ENSMUST00000227473 4197 ntBASIC11.46□□□□□ -0.58
Col6a6Q8C6K9 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms