Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Gm45925-201ENSMUST00000218882 744 ntBASIC14.87□□□□□ -0.03
Usp44Q8C2S0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.87□□□□□ -0.03
Usp44Q8C2S0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gm11793-201ENSMUST00000120433 981 ntBASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gm13786-201ENSMUST00000122371 333 ntBASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Rmrp-201ENSMUST00000157463 271 ntBASIC14.86□□□□□ -0.03
Usp44Q8C2S0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gm9630-201ENSMUST00000178304 885 ntBASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gm9022-201ENSMUST00000182482 992 ntBASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gm44124-201ENSMUST00000204159 472 ntBASIC14.86□□□□□ -0.03
Usp44Q8C2S0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gm5904-201ENSMUST00000210286 865 ntBASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp44Q8C2S0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Mir1247-201ENSMUST00000116706 82 ntBASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.85□□□□□ -0.03
Usp44Q8C2S0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms