Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ptcd1Q8C2E4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ptcd1Q8C2E4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Gm7003-201ENSMUST00000195089 312 ntBASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Gm44545-201ENSMUST00000208262 746 ntBASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Gm18393-201ENSMUST00000208349 1131 ntBASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.66■□□□□ 0.1
Ptcd1Q8C2E4 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Gm9062-201ENSMUST00000117712 727 ntBASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Gm12266-201ENSMUST00000120311 962 ntBASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Gm13813-201ENSMUST00000120998 787 ntBASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Gm24749-201ENSMUST00000157838 343 ntBASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Gm17040-202ENSMUST00000170597 889 ntBASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Gm45925-201ENSMUST00000218882 744 ntBASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Gm10312-201ENSMUST00000078515 489 ntBASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.65■□□□□ 0.1
Ptcd1Q8C2E4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms